75  sed -n '/START,START/ s/.*qi//p' <good-t |sort |less
   76  sed -n '/START/,/START/ s/.*qi//p' <good-t |sort |less
   77  less good-t 
   78  sed -n '/START/,/START/ s/.*qi//p' <good-t |sort |less
   79  sed -n '/START/,/START/ s/.*qi//p' <good-t |less
   80  sed -n '10,$ { / s/.*qi//p; /START/ q }' <good-t |less
   81  sed -n '10,$ { / s/.*qi//p; /START/{ q }; }' <good-t |less
   82  sed -n '10,$ { s/.*qi//p; /START/ q }' <good-t |less
   83  sed -n '10,$ { s/.*qi//p; /START/ q }' <good-t |less
   84  sed -n '10,$ { s/.*qi//p; /START/ q }' <good-t |sort |less
   85  sed -n '10,$ { s/.*qi//p; /START/ q }' <good-t |less
   86  less good-t 
   87  sed -n '10,$ { s/.*qi//p; /START/ q }' <good-t |less
   88  less good-t 
   89  less good-t 
   90  rm *.o; make minimise-125 OPTIMISE=-pg NPROCCFLAGS=-DNPROCESSORS=1
   91  ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM 2>t
   92  less good-t 
   93  sed -n '10,$ { s/.*qi//p; /START/ q }' <good-t |less
   94  less good-t 
   95  rm *.o; make minimise-125 OPTIMISE=-pg NPROCCFLAGS=-DNPROCESSORS=1
   96  ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM 2>t
   97  ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM 2>good-t 
   98  less good-t 
   99  sed -n '10,$ { s/.*qi//p; /START/ q }' <good-t |less
  100  less good-t 
  101  sed -n 's/.*qi//p; 10,$ { /START/ q }' <good-t |less
  102  sed -n '/START/,/START/ { s/.*qi//p; b; } /START/q' <good-t |less
  103  sed -n '/START/,/START/ { s/.*qi//p; b; }; /START/q' <good-t |less
  104  sed -n '/START/,/START/ { s/.*qi//p; b; }; /START/q' <good-t |less
  105  sed -n '/START/,/START/ { s/.*qi//p; b; }; /START/q' <good-t |sort |less
  106  sed -n '/START/,/START/ { s/.*qi//p; b; }; /START/q' <good-t |less
  107  sed -n 's/.*qi//p; 10,$ { /START/ q }' <good-t |less
  108  sed -n 's/.*qi//p; 10,$ { /START/ q }' <good-t |less
  109  sed -n 's/.*qi//p; 10,$ { /START/ q }' <good-t |sort |less
  110  rm *.o; make minimise-125 OPTIMISE=-pg
  111  ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM 2>t
  112  less t
  113  sed -n 's/.*qi//p; 10,$ { /START/ q }' <t |less
  114  less t
  115  diff -u <(sed -n 's/.*qi//p; 10,$ { /START/ q }' <good-t |sort) <(sed -n 's/.*qi//p; 10,$ { /START/ q }' <t) |less
  116  diff -u <(sed -n 's/.*qi//p; 10,$ { /START/ q }' <good-t |sort) <(sed -n 's/.*qi//p; 10,$ { /START/ q }' <t |sort) |less
  117  less t
  118  strace -ou ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM 2>t
  119  diff -u <(sed -n 's/.*qi//p; 10,$ { /START/ q }' <good-t |sort) <(sed -n 's/.*qi//p; 10,$ { /START/ q }' <t |sort) |less
  120  less t
  121  less u
  122  less u
  123  strace -fou ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM 2>t
  124  diff -u <(sed -n 's/.*qi//p; 10,$ { /START/ q }' <good-t |sort) <(sed -n 's/.*qi//p; 10,$ { /START/ q }' <t |sort) |less
  125  less t
  126  less u
  127  less t
  128  diff -u <(sed -n 's/.*qi//p; 10,$ { /START/ q }' <good-t |sort) <(sed -n 's/.*qi//p; 10,$ { /START/ q }' <t |sort) |less
  129  less t
  130  less t
  131  less u
  132  strace -s100 -fou ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM 2>t
  133  less t
  134  diff -u <(sed -n 's/.*qi//p; 10,$ { /START/ q }' <good-t |sort) <(sed -n 's/.*qi//p; 10,$ { /START/ q }' <t |sort) |less
  135  less t
  136  less t
  137  less u
  138  uname -av
  139  history >history
  140  ls
  141  cd etc/
  142  ls
  143  ls rc0.d
  144  ls rcS.d
  145  ls rcS.d/*nbd*
  146  emacs
  147  cd /usr/src/
  148  cat >gsl.runes
  149  ed gsl.runes 
  150  ed gsl.runes 
  151  cd things/moebius2/
  152  emcs
  153  emacs
  154  cd things/moebius2/
  155  cat history 
  156  ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM 2>t
  157  ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM 2>>t
  158  ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM 2>>t
  159  rm *.o; make minimise-125 OPTIMISE=-pg
  160  ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM 2>>t
  161  less t
  162  diff -u <(sed -n 's/.*qi//p; 10,$ { /START/ q }' <good-t |sort) <(sed -n 's/.*qi//p; 20,$ { /START/ q }' <t |sort) |less
  163  rm *.o; make minimise-125 OPTIMISE=-pg
  164  rm *.o; make minimise-125 OPTIMISE=-pg
  165  ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM >/dev/null 
  166  bzr diff
  167  bzr diff
  168  rm *.o; make minimise-125 OPTIMISE=-pg
  169  rm *.o; make minimise-125 OPTIMISE=-pg
  170  bzr ci -m 'machinery for checking that our OUTER parallel iteration works - before we delete it'
  171  rm *.o; make minimise-125 OPTIMISE=-pg
  172  bzr diff
  173  bzr log |less
  174  bzr diff -r115 |less
  175  bzr diff -r115 |less
  176  bzr diff -r115 |less
  177  bzr diff -r115 |less
  178  bzr ci -m 'get rid of debugging for checking OUTER iteration; leave SIGINT handler and fix to OUTER'
  179  rm *.o; make minimise-125 OPTIMISE=-pg
  180  rm *.o; make minimise-125 OPTIMISE='-O2 -pg'
  181  ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM
  182  bzr ci -m 'on SIGINT, do not exit 0'
  183  cp gmon.out gmon.out.save
  184  bzr status
  185  rm *.o; make minimise-125 OPTIMISE='-O2 -pg'
  186  rm *.o; make minimise-125 OPTIMISE='-O2 -pg'
  187  ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM
  188  ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM
  189  rm *.o; make minimise-125 OPTIMISE='-pg'
  190  ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM
  191  rm minimise-125 
  192  ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM
  193  rm *.o; make minimise-125 OPTIMISE='-pg'
  194  LD_LIBRARY_PATH=/usr/local/profile/usr/lib ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM
  195  LD_LIBRARY_PATH=/usr/local/profile/usr/lib ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM
  196  LD_LIBRARY_PATH=/usr/local/profile/usr/lib ldd ./minimise-125
  197  LD_LIBRARY_PATH=/usr/local/profile/usr/lib ldd ./minimise-125
  198  LD_LIBRARY_PATH=/usr/local/profile/usr/lib ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM
  199  rm *.o; make minimise-125 OPTIMISE='-pg'
  200  g++ -MMD -pg -g -Wall -Wwrite-strings -Wpointer-arith -Werror -Wshadow -Wno-shadow -Wno-error -o minimise-125 energy+125.o graph+125.o mgraph+125.o minimise+125.o half+125.o parallel.o common.o -lgsl -lgslcblas -lpthread
  201  g++ -MMD -pg -g -Wall -Wwrite-strings -Wpointer-arith -Werror -Wshadow -Wno-shadow -Wno-error -o minimise-125 energy+125.o graph+125.o mgraph+125.o minimise+125.o half+125.o parallel.o common.o /usr/src/profile/gsl-1.10/.libs/libgsl.a /usr/src/profile/gsl-1.10/cblas/.libs/libgslcblas.a -lpthread
  202  LD_LIBRARY_PATH=/usr/local/profile/usr/lib ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM
  203  LD_LIBRARY_PATH=/usr/local/profile/usr/lib ldd ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM
  204   ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM
  205  g++ -MMD -pg -g -Wall -Wwrite-strings -Wpointer-arith -Werror -Wshadow -Wno-shadow -Wno-error -o minimise-125 energy+125.o graph+125.o mgraph+125.o minimise+125.o half+125.o parallel.o common.o /usr/src/profile/gsl-1.10/.libs/libgsl.a /usr/src/profile/gsl-1.10/cblas/.libs/libgslcblas.a -lpthread
  206   ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM
  207  bzr diff
  208  bzr diff
  209  bzr diff
  210  rm *.o; make minimise-125 OPTIMISE='-pg'
  211  rm *.o; make minimise-125 OPTIMISE='-pg'
  212  g++ -MMD -pg -g -Wall -Wwrite-strings -Wpointer-arith -Werror -Wshadow -Wno-shadow -Wno-error -o minimise-125 energy+125.o graph+125.o mgraph+125.o minimise+125.o half+125.o parallel.o common.o /usr/src/profile/gsl-1.10/.libs/libgsl.a /usr/src/profile/gsl-1.10/cblas/.libs/libgslcblas.a -lpthread
  213   ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM
  214  rm *.o; make minimise-125 OPTIMISE='-pg'
  215  rm *.o; make minimise-125 OPTIMISE='-pg -O3'
  216  g++ -MMD -pg -g -Wall -Wwrite-strings -Wpointer-arith -Werror -Wshadow -Wno-shadow -Wno-error -o minimise-125 energy+125.o graph+125.o mgraph+125.o minimise+125.o half+125.o parallel.o common.o /usr/src/profile/gsl-1.10/.libs/libgsl.a /usr/src/profile/gsl-1.10/cblas/.libs/libgslcblas.a -lpthread
  217   ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM
  218  bzr status
  219  bzr diff energy.c
  220  bzr ci -m 'actually do precomputations!' energy.c
  221  less history 
  222  history >history 
  223  bzr diff Makefile
  224  bzr ci -m 'use -O3' Makefile
  225  grep main *.c
  226  rm *.o; make minimise-125 OPTIMISE='-pg -O3'
  227  rm *.o; make minimise-125 OPTIMISE='-pg -O3'
  228  g++ -MMD -pg -g -Wall -Wwrite-strings -Wpointer-arith -Werror -Wshadow -Wno-shadow -Wno-error -o minimise-125 energy+125.o graph+125.o mgraph+125.o minimise+125.o half+125.o parallel.o common.o /usr/src/profile/gsl-1.10/.libs/libgsl.a /usr/src/profile/gsl-1.10/cblas/.libs/libgslcblas.a -lpthread
  229   ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM
  230  bzr status
  231  bzr ci -m 'memoise edge_end2 now performance is good'
  232  cd /usr/local/profile/
  233  dpkg -x /usr/src/profile/libgsl0-dbg_1.10-4_i386.deb 
  234  dpkg -x /usr/src/profile/libgsl0-dbg_1.10-4_i386.deb .
  235  ls -ald .
  236  really chown ian .
  237  dpkg -x /usr/src/profile/libgsl0-dbg_1.10-4_i386.deb .
  238  dpkg -x /usr/src/profile/libgsl0-dev_1.10-4_i386.deb .
  239  dpkg -x /usr/src/profile/libgsl0ldbl_1.10-4_i386.deb .
  240  ls usr/lib/
  241  file usr/lib/libgsl.so.0.10.0 
  242  dpkg -x /usr/src/profile/libgsl0ldbl_1.10-4_i386.deb .
  243  dpkg -x /usr/src/profile/libgsl0-dev_1.10-4_i386.deb .
  244  dpkg -x /usr/src/profile/libgsl0-dbg_1.10-4_i386.deb .
  245  history
  246  pwd
  247  man gprof
  248  man 3 monitor
  249  man 3 profil
  250  info gcc
  251  man gcc
  252  man -k gcc
  253  cd /usr/src/gsl-1.10/
  254  ls
  255  cd ..
  256  ls
  257  mkdir profile
  258  cd profile/
  259  apt-get source gsl
  260  cd gsl-1.10/
  261  ls
  262  less debian/rules 
  263  patch -p1 <../../gsl.patch 
  264  DEBUGFLAGS='-g -O3 -pg' dpkg-buildpackage -us -uc -rfakeroot -b
  265  MAKEFLAGS=-j16 DEBUGFLAGS='-g -O3 -pg' dpkg-buildpackage -us -uc -rfakeroot -b
  266  MAKEFLAGS=-j16 DEBUGFLAGS='-g -O3 -pg' dpkg-buildpackage -us -uc -rfakeroot -b
  267  MAKEFLAGS=-j16 DEBUGFLAGS='-g -O3 -pg' dpkg-buildpackage -us -uc -rfakeroot -b
  268  less debian/rules 
  269  cd ..
  270  rm -rf gsl-1.10 
  271  apt-get source gsl
  272  cd gsl-1.10/
  273  patch -p1 <../../gsl.patch 
  274  MAKE='make -j16' DEBUGFLAGS='-g -O3 -pg' dpkg-buildpackage -us -uc -rfakeroot -b
  275  debian/rules clean
  276  fakeroot debian/rules clean
  277  MAKE='make -j16' debian/rules build DEBUGFLAGS='-g -O3 -pg'
  278  fakeroot debian/rules binary DEBUGFLAGS='-g -O3 -pg'
  279  less debian/rules 
  280  man dh_strip
  281  fakeroot debian/rules clean
  282  DEB_BUILD_OPTIONS=nostrip MAKE='make -j16' debian/rules build DEBUGFLAGS='-g -O3 -pg'
  283  DEB_BUILD_OPTIONS=nostrip MAKE='make -j16' fakeroot debian/rules binary DEBUGFLAGS='-g -O3 -pg'
  284  find -name '*.a'
  285  find -name 'libgsl.a'
  286  find -name '*blas*.a'
  287  history
  288  patch -p1 </usr/src/gsl.patch2
  289  fakeroot debian/rules clean
  290  MAKE='make -j16' debian/rules build DEBUGFLAGS='-g -O3 -pg'
  291  fakeroot debian/rules clean
  292  DEB_BUILD_OPTIONS=nostrip MAKE='make -j16' debian/rules build DEBUGFLAGS='-g -O3 -pg'
  293  fakeroot debian/rules clean
  294  DEB_BUILD_OPTIONS=nostrip MAKE='make -j16' debian/rules build DEBUGFLAGS='-g -O3 -pg'
  295  DEB_BUILD_OPTIONS=nostrip MAKE='make -j16' fakeroot debian/rules binary DEBUGFLAGS='-g -O3 -pg'
  296  cd /usr/src/
  297  mkdir orig
  298  cd orig
  299  apt-get source gsl
  300  cd ..
  301  diff -ru {orig/,}gsl-1.10 |less
  302  diff -ru {orig/,}gsl-1.10/multimin |less
  303  mkdir orig2
  304  rsync -a --delete orig/gsl-1.10 orig2/.
  305  cd orig2/gsl-1.10/
  306  patch -p1 <../../gsl.patch
  307  cd ../..
  308  diff -ru {orig2/,}gsl-1.10/multimin |less
  309  diff -ru {orig2/,}gsl-1.10/multimin >gsl.patch2 
  310  diff -ru {orig2/,}gsl-1.10/multimin >gsl.patch2 
  311  diff -ru {orig2/,}gsl-1.10/multimin >gsl.patch2 
  312  diff -ru {orig2/,}gsl-1.10/multimin >gsl.patch2 
  313  diff -ru {orig2/,}gsl-1.10/multimin >gsl.patch2 
  314  diff -ru {orig2/,}gsl-1.10/multimin >gsl.patch2 
  315  diff -ru {orig2/,}gsl-1.10/multimin >gsl.patch2 
  316  diff --exclude=\*{.orig,.rej,~} -ru {orig2/,}gsl-1.10/multimin >gsl.patch2 
  317  echo diff --exclude=\*{.orig,.rej,~} -ru {orig2/,}gsl-1.10/multimin
  318  diff --exclude=\*{.orig,.rej,~} -ru {orig2/,}gsl-1.10/multimin >gsl.patch2 
  319  diff --exclude=\*{.orig,.rej,~} -ru {orig2/,}gsl-1.10/multimin >gsl.patch2 
  320  diff --exclude=\*{.orig,.rej,~} -ru {orig2/,}gsl-1.10/multimin >gsl.patch2 
  321  cd things/moebius2/
  322  gprof minimise-125 |less
  323  gprof minimise-125 |less
  324  gprof minimise-125 |less
  325  gprof minimise-125 |less
  326  gprof minimise-125 |less
  327  gprof minimise-125 |less
  328  gprof minimise-125 |less
  329  gprof minimise-125 |less
  330  gprof minimise-125 |less
  331  gprof minimise-125 |less
  332  gprof minimise-125 |less
  333  gprof minimise-125 |less
  334  gprof minimise-125 |less
  335  gprof minimise-125 |less
  336  gprof minimise-125 |less
  337  gprof minimise-125 |less
  338  cd things/moebius2/
  339  grep graph_layout_prepare *.c
  340  cd /usr/src/gsl-1.10/
  341  dpkg -l '*gsl*'
  342  find -name '*prof*'
  343  cd
  344  cd -
  345  ls
  346  less debian/rules 
  347  grep -R profil *
  348  fakeroot debian/rules clean
  349  DEB_BUILD_OPTIONS=nostrip MAKE='make -j16' debian/rules build
  350  DEB_BUILD_OPTIONS=nostrip MAKE='make -j16' fakeroot debian/rules binary
  351  patch -p1 <../gsl.patch2 
  352  patch -p1 <../gsl.patch2 
  353  mv multimin/simplex.c.orig  multimin/simplex.c
  354  patch -U -p1 <../gsl.patch2 
  355  mkdir ~/junk
  356  mkdir ~/junk/d
  357  mv multimin/simplex.c.orig  multimin/simplex.c
  358  diff -u ~/junk/d/simplex.c multimin/simplex.c |less
  359  patch -U -p1 <../gsl.patch2 
  360  mv multimin/simplex.c.orig  multimin/simplex.c
  361  patch -U -p1 <../gsl.patch2 
  362  less ../gsl.patch2 
  363  mv multimin/simplex.c.orig  multimin/simplex.c
  364  patch -U -p1 <../gsl.patch2 
  365  mv multimin/simplex.c.orig  multimin/simplex.c
  366  patch -U -p1 <../gsl.patch2 
  367  diff -u ~/junk/d/simplex.c multimin/simplex.c |less
  368  mv multimin/simplex.c.orig  multimin/simplex.c
  369  diff -u ~/junk/d/simplex.c multimin/simplex.c |less
  370  patch -U -p1 <../gsl.patch2 
  371  diff -u ~/junk/d/simplex.c multimin/simplex.c.orig |less
  372  diff -u ~/junk/d/simplex.c multimin/simplex.c.orig |less
  373  history
  374  fakeroot debian/rules clean
  375  DEB_BUILD_OPTIONS=nostrip MAKE='make -j16' debian/rules build
  376  fakeroot debian/rules clean
  377  DEB_BUILD_OPTIONS=nostrip MAKE='make -j16' debian/rules build
  378  DEB_BUILD_OPTIONS=nostrip MAKE='make -j16' fakeroot debian/rules binary
  379  cd things/moebius2/
  380  grep graph_layout_prepare *.c
  381  less things/moebius2/Makefile
  382  emacs things/moebius2/energy.c
  383  cd things/moebius2/
  384  rm *.o; make minimise-125
  385  ./interpolate-246 -aa start-125.cfm -ostart-246.cfm
  386  make interpolate-246
  387  ./interpolate-246 -aa start-125.cfm -ostart-246.cfm
  388  make minimise-246
  389  make minimise-246
  390  ./interpolate-246 -aa start-125.cfm -ostart-246.cfm
  391   ./minimise-246 start-246.cfm -iwip-246.CFM -obest-246.CFM
  392  bzr diff
  393  bzr ci -m 'allow compiling spuriously with XBITS>=6'
  394  make
  395  make
  396  make -j8
  397  bzr diff
  398  bzr ci -m 'primer does not need mgraph_prepare'
  399   ./minimise-246 start-246.cfm -iwip-246.CFM -obest-246.CFM
  400   ./minimise-246 start-246.cfm -iwip-246.CFM -obest-246.CFM
  401   ./minimise-246 start-246.cfm -iwip-246.CFM -obest-246.CFM
  402   ./minimise-246 start-246.cfm -iwip-246.CFM -obest-246.CFM
  403  top
  404  cd things/moebius2
  405  bzr status
  406  ls
  407  make compute
  408  make clean
  409  make -j4
  410  make compute
  411  pwd
  412  make compute
  413  rm best-33.CFM 
  414  make compute
  415  make -n compute
  416  make -n best-968.CFM
  417  make -n best-33.CFM
  418  make best-33.CFM
  419  make best-64.CFM
  420  make best-64.cfm
  421  ./interpolate-64 -aa best-33.CFM -ostart-64.cfm
  422  ./minimise-64 start-64.cfm -iwip-64.CFM -obest-64.CFM
  423  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  424  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  425  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  426  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  427  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  428  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  429  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  430  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  431  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  432  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  433  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  434  history >nice-64.history
  435  fg
  436  fg
  437  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  438  bzr status
  439  history >nice-64.history
  440  bzr ci -m 'stopping point for 64'
  441  bzr status
  442  bzr status
  443  cd things/moebius2
  444  bzr status
  445  bzr diff
  446  bzr ci -m 'adjusted costs for 64'
  447  top
  448  top
  449  top
  450  cd things/moebius2/
  451  ./interpolate-125 -aa best-64.CFM -ostart-1256.cfm
  452  ./interpolate-125 -aa best-64.CFM -ostart-125.cfm
  453  rm ./start-1256.cfm 
  454  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  455  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  456  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  457  cp start-125.cfm wip-125.cfm 
  458  cp start-125.cfm wip-125.cfm 
  459  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  460  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  461  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  462  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  463  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  464  ls -al minimise-125 
  465  date
  466  lsss energy.c 
  467  less energy.c 
  468  make minimise-125
  469  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  470  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  471  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  472  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  473  ls
  474  ls *hist8
  475  ls *hist*
  476  history >wip-125.history
  477  bzr status
  478  bzr diff |les
  479  bzr diff |less
  480  bzr ci -m 'attempts to fix 125; really need to combine edge length variation and bending costs'
  481  bzr update
  482  ls ../
  483  bzr pull ../moebius2-from-liberator
  484  bzr merge ../moebius2-from-liberator
  485  bzr status
  486  bzr diff
  487  bzr ci -m merge
  488  bzr push
  489  bzr pull ../moebius2-from-liberator
  490  bzr merge ../moebius2-from-liberator
  491  bzr status
  492  bzr ci -m merge
  493  bzr status
  494  bzr pull ../moebius2-from-liberator
  495  cd things/moebius2
  496  pwd
  497  bzr pull ../moebius2-from-liberator
  498  cat new-costs.history 
  499  cp start-64.cfm wip-64.cfm 
  500  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  501  cp wip-64.cfm best-64.CFM
  502  ./interpolate-125 -aa best-64.CFM -ostart-125.cfm
  503  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  504  cp start-125.cfm wip-125.cfm
  505  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  506  ./minimise-125 wip-125.cfm -iwip-125.cfm -obest-125.CFM
  507  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  508  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  509  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  510  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  511  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  512  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  513  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  514  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  515  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  516  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  517  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  518  ./interpolate-125 -aa best-64.CFM -ostart-125.cfm
  519  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  520  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  521  ./interpolate-125 -aa wip-64.cfm -ostart-125.cfm
  522  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  523  bzr status
  524  bzr diff
  525  bzr diff Makefile 
  526  bzr ci -m 'build more stuff' Makefile 
  527  bzr stauts
  528  bzr status
  529  bzr ci -m 'wip energy functions'
  530  bzr pull ../moebius2-from-liberator/
  531  bzr status
  532  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  533  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  534  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  535  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  536  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  537  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  538  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  539  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  540  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM 2>&1 |less
  541  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM 2>&1 |less
  542  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM 2>&1 |less
  543  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM 
  544  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM 
  545  bzr ci -m 'before abandon this version of rim twist which is nonsense'
  546  bzr ci -m 'before abandon this version of rim twist which is nonsense'
  547  bzr uncommit
  548  bzr status
  549  bzr log |less
  550  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM 
  551  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM 
  552  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM 
  553  ./interpolate-125 -aa best-64.CFM -ostart-125.cfm
  554  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  555  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  556  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  557  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  558  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  559  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  560  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  561  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  562  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  563  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  564  bzr status
  565  bzr ci -m 'wip before increase power of bendings'
  566  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  567  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  568  bzr status
  569  bzr diff
  570  bzr ci -m 'changed powers on vertex displacements  -- tweaked parameters for XBITS==5'
  571  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM 
  572  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM 
  573  bzr status
  574  history >nice-64.history 
    6  less good-t 
    7  rm *.o; make minimise-125 OPTIMISE=-pg NPROCCFLAGS=-DNPROCESSORS=1
    8  ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM 2>t
    9  ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM 2>good-t 
   10  less good-t 
   11  sed -n '10,$ { s/.*qi//p; /START/ q }' <good-t |less
   12  less good-t 
   13  sed -n 's/.*qi//p; 10,$ { /START/ q }' <good-t |less
   14  sed -n '/START/,/START/ { s/.*qi//p; b; } /START/q' <good-t |less
   15  sed -n '/START/,/START/ { s/.*qi//p; b; }; /START/q' <good-t |less
   16  sed -n '/START/,/START/ { s/.*qi//p; b; }; /START/q' <good-t |less
   17  sed -n '/START/,/START/ { s/.*qi//p; b; }; /START/q' <good-t |sort |less
   18  sed -n '/START/,/START/ { s/.*qi//p; b; }; /START/q' <good-t |less
   19  sed -n 's/.*qi//p; 10,$ { /START/ q }' <good-t |less
   20  sed -n 's/.*qi//p; 10,$ { /START/ q }' <good-t |less
   21  sed -n 's/.*qi//p; 10,$ { /START/ q }' <good-t |sort |less
   22  rm *.o; make minimise-125 OPTIMISE=-pg
   23  ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM 2>t
   24  less t
   25  sed -n 's/.*qi//p; 10,$ { /START/ q }' <t |less
   26  less t
   27  diff -u <(sed -n 's/.*qi//p; 10,$ { /START/ q }' <good-t |sort) <(sed -n 's/.*qi//p; 10,$ { /START/ q }' <t) |less
   28  diff -u <(sed -n 's/.*qi//p; 10,$ { /START/ q }' <good-t |sort) <(sed -n 's/.*qi//p; 10,$ { /START/ q }' <t |sort) |less
   29  less t
   30  strace -ou ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM 2>t
   31  diff -u <(sed -n 's/.*qi//p; 10,$ { /START/ q }' <good-t |sort) <(sed -n 's/.*qi//p; 10,$ { /START/ q }' <t |sort) |less
   32  less t
   33  less u
   34  less u
   35  strace -fou ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM 2>t
   36  diff -u <(sed -n 's/.*qi//p; 10,$ { /START/ q }' <good-t |sort) <(sed -n 's/.*qi//p; 10,$ { /START/ q }' <t |sort) |less
   37  less t
   38  less u
   39  less t
   40  diff -u <(sed -n 's/.*qi//p; 10,$ { /START/ q }' <good-t |sort) <(sed -n 's/.*qi//p; 10,$ { /START/ q }' <t |sort) |less
   41  less t
   42  less t
   43  less u
   44  strace -s100 -fou ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM 2>t
   45  less t
   46  diff -u <(sed -n 's/.*qi//p; 10,$ { /START/ q }' <good-t |sort) <(sed -n 's/.*qi//p; 10,$ { /START/ q }' <t |sort) |less
   47  less t
   48  less t
   49  less u
   50  uname -av
   51  history >history
   52  ls
   53  cd etc/
   54  ls
   55  ls rc0.d
   56  ls rcS.d
   57  ls rcS.d/*nbd*
   58  emacs
   59  cd /usr/src/
   60  cat >gsl.runes
   61  ed gsl.runes 
   62  ed gsl.runes 
   63  cd things/moebius2/
   64  emcs
   65  emacs
   66  cd things/moebius2/
   67  cat history 
   68  ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM 2>t
   69  ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM 2>>t
   70  ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM 2>>t
   71  rm *.o; make minimise-125 OPTIMISE=-pg
   72  ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM 2>>t
   73  less t
   74  diff -u <(sed -n 's/.*qi//p; 10,$ { /START/ q }' <good-t |sort) <(sed -n 's/.*qi//p; 20,$ { /START/ q }' <t |sort) |less
   75  rm *.o; make minimise-125 OPTIMISE=-pg
   76  rm *.o; make minimise-125 OPTIMISE=-pg
   77  ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM >/dev/null 
   78  bzr diff
   79  bzr diff
   80  rm *.o; make minimise-125 OPTIMISE=-pg
   81  rm *.o; make minimise-125 OPTIMISE=-pg
   82  bzr ci -m 'machinery for checking that our OUTER parallel iteration works - before we delete it'
   83  rm *.o; make minimise-125 OPTIMISE=-pg
   84  bzr diff
   85  bzr log |less
   86  bzr diff -r115 |less
   87  bzr diff -r115 |less
   88  bzr diff -r115 |less
   89  bzr diff -r115 |less
   90  bzr ci -m 'get rid of debugging for checking OUTER iteration; leave SIGINT handler and fix to OUTER'
   91  rm *.o; make minimise-125 OPTIMISE=-pg
   92  rm *.o; make minimise-125 OPTIMISE='-O2 -pg'
   93  ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM
   94  bzr ci -m 'on SIGINT, do not exit 0'
   95  cp gmon.out gmon.out.save
   96  bzr status
   97  rm *.o; make minimise-125 OPTIMISE='-O2 -pg'
   98  rm *.o; make minimise-125 OPTIMISE='-O2 -pg'
   99  ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM
  100  ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM
  101  rm *.o; make minimise-125 OPTIMISE='-pg'
  102  ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM
  103  rm minimise-125 
  104  ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM
  105  rm *.o; make minimise-125 OPTIMISE='-pg'
  106  LD_LIBRARY_PATH=/usr/local/profile/usr/lib ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM
  107  LD_LIBRARY_PATH=/usr/local/profile/usr/lib ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM
  108  LD_LIBRARY_PATH=/usr/local/profile/usr/lib ldd ./minimise-125
  109  LD_LIBRARY_PATH=/usr/local/profile/usr/lib ldd ./minimise-125
  110  LD_LIBRARY_PATH=/usr/local/profile/usr/lib ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM
  111  rm *.o; make minimise-125 OPTIMISE='-pg'
  112  g++ -MMD -pg -g -Wall -Wwrite-strings -Wpointer-arith -Werror -Wshadow -Wno-shadow -Wno-error -o minimise-125 energy+125.o graph+125.o mgraph+125.o minimise+125.o half+125.o parallel.o common.o -lgsl -lgslcblas -lpthread
  113  g++ -MMD -pg -g -Wall -Wwrite-strings -Wpointer-arith -Werror -Wshadow -Wno-shadow -Wno-error -o minimise-125 energy+125.o graph+125.o mgraph+125.o minimise+125.o half+125.o parallel.o common.o /usr/src/profile/gsl-1.10/.libs/libgsl.a /usr/src/profile/gsl-1.10/cblas/.libs/libgslcblas.a -lpthread
  114  LD_LIBRARY_PATH=/usr/local/profile/usr/lib ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM
  115  LD_LIBRARY_PATH=/usr/local/profile/usr/lib ldd ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM
  116   ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM
  117  g++ -MMD -pg -g -Wall -Wwrite-strings -Wpointer-arith -Werror -Wshadow -Wno-shadow -Wno-error -o minimise-125 energy+125.o graph+125.o mgraph+125.o minimise+125.o half+125.o parallel.o common.o /usr/src/profile/gsl-1.10/.libs/libgsl.a /usr/src/profile/gsl-1.10/cblas/.libs/libgslcblas.a -lpthread
  118   ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM
  119  bzr diff
  120  bzr diff
  121  bzr diff
  122  rm *.o; make minimise-125 OPTIMISE='-pg'
  123  rm *.o; make minimise-125 OPTIMISE='-pg'
  124  g++ -MMD -pg -g -Wall -Wwrite-strings -Wpointer-arith -Werror -Wshadow -Wno-shadow -Wno-error -o minimise-125 energy+125.o graph+125.o mgraph+125.o minimise+125.o half+125.o parallel.o common.o /usr/src/profile/gsl-1.10/.libs/libgsl.a /usr/src/profile/gsl-1.10/cblas/.libs/libgslcblas.a -lpthread
  125   ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM
  126  rm *.o; make minimise-125 OPTIMISE='-pg'
  127  rm *.o; make minimise-125 OPTIMISE='-pg -O3'
  128  g++ -MMD -pg -g -Wall -Wwrite-strings -Wpointer-arith -Werror -Wshadow -Wno-shadow -Wno-error -o minimise-125 energy+125.o graph+125.o mgraph+125.o minimise+125.o half+125.o parallel.o common.o /usr/src/profile/gsl-1.10/.libs/libgsl.a /usr/src/profile/gsl-1.10/cblas/.libs/libgslcblas.a -lpthread
  129   ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM
  130  bzr status
  131  bzr diff energy.c
  132  bzr ci -m 'actually do precomputations!' energy.c
  133  less history 
  134  history >history 
  135  bzr diff Makefile
  136  bzr ci -m 'use -O3' Makefile
  137  grep main *.c
  138  rm *.o; make minimise-125 OPTIMISE='-pg -O3'
  139  rm *.o; make minimise-125 OPTIMISE='-pg -O3'
  140  g++ -MMD -pg -g -Wall -Wwrite-strings -Wpointer-arith -Werror -Wshadow -Wno-shadow -Wno-error -o minimise-125 energy+125.o graph+125.o mgraph+125.o minimise+125.o half+125.o parallel.o common.o /usr/src/profile/gsl-1.10/.libs/libgsl.a /usr/src/profile/gsl-1.10/cblas/.libs/libgslcblas.a -lpthread
  141   ./minimise-125 start-125.cfm -iwip-125.CFM -obest-125.CFM
  142  bzr status
  143  bzr ci -m 'memoise edge_end2 now performance is good'
  144  cd /usr/local/profile/
  145  dpkg -x /usr/src/profile/libgsl0-dbg_1.10-4_i386.deb 
  146  dpkg -x /usr/src/profile/libgsl0-dbg_1.10-4_i386.deb .
  147  ls -ald .
  148  really chown ian .
  149  dpkg -x /usr/src/profile/libgsl0-dbg_1.10-4_i386.deb .
  150  dpkg -x /usr/src/profile/libgsl0-dev_1.10-4_i386.deb .
  151  dpkg -x /usr/src/profile/libgsl0ldbl_1.10-4_i386.deb .
  152  ls usr/lib/
  153  file usr/lib/libgsl.so.0.10.0 
  154  dpkg -x /usr/src/profile/libgsl0ldbl_1.10-4_i386.deb .
  155  dpkg -x /usr/src/profile/libgsl0-dev_1.10-4_i386.deb .
  156  dpkg -x /usr/src/profile/libgsl0-dbg_1.10-4_i386.deb .
  157  history
  158  pwd
  159  man gprof
  160  man 3 monitor
  161  man 3 profil
  162  info gcc
  163  man gcc
  164  man -k gcc
  165  cd /usr/src/gsl-1.10/
  166  ls
  167  cd ..
  168  ls
  169  mkdir profile
  170  cd profile/
  171  apt-get source gsl
  172  cd gsl-1.10/
  173  ls
  174  less debian/rules 
  175  patch -p1 <../../gsl.patch 
  176  DEBUGFLAGS='-g -O3 -pg' dpkg-buildpackage -us -uc -rfakeroot -b
  177  MAKEFLAGS=-j16 DEBUGFLAGS='-g -O3 -pg' dpkg-buildpackage -us -uc -rfakeroot -b
  178  MAKEFLAGS=-j16 DEBUGFLAGS='-g -O3 -pg' dpkg-buildpackage -us -uc -rfakeroot -b
  179  MAKEFLAGS=-j16 DEBUGFLAGS='-g -O3 -pg' dpkg-buildpackage -us -uc -rfakeroot -b
  180  less debian/rules 
  181  cd ..
  182  rm -rf gsl-1.10 
  183  apt-get source gsl
  184  cd gsl-1.10/
  185  patch -p1 <../../gsl.patch 
  186  MAKE='make -j16' DEBUGFLAGS='-g -O3 -pg' dpkg-buildpackage -us -uc -rfakeroot -b
  187  debian/rules clean
  188  fakeroot debian/rules clean
  189  MAKE='make -j16' debian/rules build DEBUGFLAGS='-g -O3 -pg'
  190  fakeroot debian/rules binary DEBUGFLAGS='-g -O3 -pg'
  191  less debian/rules 
  192  man dh_strip
  193  fakeroot debian/rules clean
  194  DEB_BUILD_OPTIONS=nostrip MAKE='make -j16' debian/rules build DEBUGFLAGS='-g -O3 -pg'
  195  DEB_BUILD_OPTIONS=nostrip MAKE='make -j16' fakeroot debian/rules binary DEBUGFLAGS='-g -O3 -pg'
  196  find -name '*.a'
  197  find -name 'libgsl.a'
  198  find -name '*blas*.a'
  199  history
  200  patch -p1 </usr/src/gsl.patch2
  201  fakeroot debian/rules clean
  202  MAKE='make -j16' debian/rules build DEBUGFLAGS='-g -O3 -pg'
  203  fakeroot debian/rules clean
  204  DEB_BUILD_OPTIONS=nostrip MAKE='make -j16' debian/rules build DEBUGFLAGS='-g -O3 -pg'
  205  fakeroot debian/rules clean
  206  DEB_BUILD_OPTIONS=nostrip MAKE='make -j16' debian/rules build DEBUGFLAGS='-g -O3 -pg'
  207  DEB_BUILD_OPTIONS=nostrip MAKE='make -j16' fakeroot debian/rules binary DEBUGFLAGS='-g -O3 -pg'
  208  cd /usr/src/
  209  mkdir orig
  210  cd orig
  211  apt-get source gsl
  212  cd ..
  213  diff -ru {orig/,}gsl-1.10 |less
  214  diff -ru {orig/,}gsl-1.10/multimin |less
  215  mkdir orig2
  216  rsync -a --delete orig/gsl-1.10 orig2/.
  217  cd orig2/gsl-1.10/
  218  patch -p1 <../../gsl.patch
  219  cd ../..
  220  diff -ru {orig2/,}gsl-1.10/multimin |less
  221  diff -ru {orig2/,}gsl-1.10/multimin >gsl.patch2 
  222  diff -ru {orig2/,}gsl-1.10/multimin >gsl.patch2 
  223  diff -ru {orig2/,}gsl-1.10/multimin >gsl.patch2 
  224  diff -ru {orig2/,}gsl-1.10/multimin >gsl.patch2 
  225  diff -ru {orig2/,}gsl-1.10/multimin >gsl.patch2 
  226  diff -ru {orig2/,}gsl-1.10/multimin >gsl.patch2 
  227  diff -ru {orig2/,}gsl-1.10/multimin >gsl.patch2 
  228  diff --exclude=\*{.orig,.rej,~} -ru {orig2/,}gsl-1.10/multimin >gsl.patch2 
  229  echo diff --exclude=\*{.orig,.rej,~} -ru {orig2/,}gsl-1.10/multimin
  230  diff --exclude=\*{.orig,.rej,~} -ru {orig2/,}gsl-1.10/multimin >gsl.patch2 
  231  diff --exclude=\*{.orig,.rej,~} -ru {orig2/,}gsl-1.10/multimin >gsl.patch2 
  232  diff --exclude=\*{.orig,.rej,~} -ru {orig2/,}gsl-1.10/multimin >gsl.patch2 
  233  cd things/moebius2/
  234  gprof minimise-125 |less
  235  gprof minimise-125 |less
  236  gprof minimise-125 |less
  237  gprof minimise-125 |less
  238  gprof minimise-125 |less
  239  gprof minimise-125 |less
  240  gprof minimise-125 |less
  241  gprof minimise-125 |less
  242  gprof minimise-125 |less
  243  gprof minimise-125 |less
  244  gprof minimise-125 |less
  245  gprof minimise-125 |less
  246  gprof minimise-125 |less
  247  gprof minimise-125 |less
  248  gprof minimise-125 |less
  249  gprof minimise-125 |less
  250  cd things/moebius2/
  251  grep graph_layout_prepare *.c
  252  cd /usr/src/gsl-1.10/
  253  dpkg -l '*gsl*'
  254  find -name '*prof*'
  255  cd
  256  cd -
  257  ls
  258  less debian/rules 
  259  grep -R profil *
  260  fakeroot debian/rules clean
  261  DEB_BUILD_OPTIONS=nostrip MAKE='make -j16' debian/rules build
  262  DEB_BUILD_OPTIONS=nostrip MAKE='make -j16' fakeroot debian/rules binary
  263  patch -p1 <../gsl.patch2 
  264  patch -p1 <../gsl.patch2 
  265  mv multimin/simplex.c.orig  multimin/simplex.c
  266  patch -U -p1 <../gsl.patch2 
  267  mkdir ~/junk
  268  mkdir ~/junk/d
  269  mv multimin/simplex.c.orig  multimin/simplex.c
  270  diff -u ~/junk/d/simplex.c multimin/simplex.c |less
  271  patch -U -p1 <../gsl.patch2 
  272  mv multimin/simplex.c.orig  multimin/simplex.c
  273  patch -U -p1 <../gsl.patch2 
  274  less ../gsl.patch2 
  275  mv multimin/simplex.c.orig  multimin/simplex.c
  276  patch -U -p1 <../gsl.patch2 
  277  mv multimin/simplex.c.orig  multimin/simplex.c
  278  patch -U -p1 <../gsl.patch2 
  279  diff -u ~/junk/d/simplex.c multimin/simplex.c |less
  280  mv multimin/simplex.c.orig  multimin/simplex.c
  281  diff -u ~/junk/d/simplex.c multimin/simplex.c |less
  282  patch -U -p1 <../gsl.patch2 
  283  diff -u ~/junk/d/simplex.c multimin/simplex.c.orig |less
  284  diff -u ~/junk/d/simplex.c multimin/simplex.c.orig |less
  285  history
  286  fakeroot debian/rules clean
  287  DEB_BUILD_OPTIONS=nostrip MAKE='make -j16' debian/rules build
  288  fakeroot debian/rules clean
  289  DEB_BUILD_OPTIONS=nostrip MAKE='make -j16' debian/rules build
  290  DEB_BUILD_OPTIONS=nostrip MAKE='make -j16' fakeroot debian/rules binary
  291  cd things/moebius2/
  292  grep graph_layout_prepare *.c
  293  less things/moebius2/Makefile
  294  emacs things/moebius2/energy.c
  295  cd things/moebius2/
  296  rm *.o; make minimise-125
  297  ./interpolate-246 -aa start-125.cfm -ostart-246.cfm
  298  make interpolate-246
  299  ./interpolate-246 -aa start-125.cfm -ostart-246.cfm
  300  make minimise-246
  301  make minimise-246
  302  ./interpolate-246 -aa start-125.cfm -ostart-246.cfm
  303   ./minimise-246 start-246.cfm -iwip-246.CFM -obest-246.CFM
  304  bzr diff
  305  bzr ci -m 'allow compiling spuriously with XBITS>=6'
  306  make
  307  make
  308  make -j8
  309  bzr diff
  310  bzr ci -m 'primer does not need mgraph_prepare'
  311   ./minimise-246 start-246.cfm -iwip-246.CFM -obest-246.CFM
  312   ./minimise-246 start-246.cfm -iwip-246.CFM -obest-246.CFM
  313   ./minimise-246 start-246.cfm -iwip-246.CFM -obest-246.CFM
  314   ./minimise-246 start-246.cfm -iwip-246.CFM -obest-246.CFM
  315  top
  316  cd things/moebius2
  317  bzr status
  318  ls
  319  make compute
  320  make clean
  321  make -j4
  322  make compute
  323  pwd
  324  make compute
  325  rm best-33.CFM 
  326  make compute
  327  make -n compute
  328  make -n best-968.CFM
  329  make -n best-33.CFM
  330  make best-33.CFM
  331  make best-64.CFM
  332  make best-64.cfm
  333  ./interpolate-64 -aa best-33.CFM -ostart-64.cfm
  334  ./minimise-64 start-64.cfm -iwip-64.CFM -obest-64.CFM
  335  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  336  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  337  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  338  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  339  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  340  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  341  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  342  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  343  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  344  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  345  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  346  history >nice-64.history
  347  fg
  348  fg
  349  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  350  bzr status
  351  history >nice-64.history
  352  bzr ci -m 'stopping point for 64'
  353  bzr status
  354  bzr status
  355  cd things/moebius2
  356  bzr status
  357  bzr diff
  358  bzr ci -m 'adjusted costs for 64'
  359  top
  360  top
  361  top
  362  cd things/moebius2/
  363  ./interpolate-125 -aa best-64.CFM -ostart-1256.cfm
  364  ./interpolate-125 -aa best-64.CFM -ostart-125.cfm
  365  rm ./start-1256.cfm 
  366  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  367  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  368  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  369  cp start-125.cfm wip-125.cfm 
  370  cp start-125.cfm wip-125.cfm 
  371  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  372  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  373  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  374  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  375  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  376  ls -al minimise-125 
  377  date
  378  lsss energy.c 
  379  less energy.c 
  380  make minimise-125
  381  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  382  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  383  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  384  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  385  ls
  386  ls *hist8
  387  ls *hist*
  388  history >wip-125.history
  389  bzr status
  390  bzr diff |les
  391  bzr diff |less
  392  bzr ci -m 'attempts to fix 125; really need to combine edge length variation and bending costs'
  393  bzr update
  394  ls ../
  395  bzr pull ../moebius2-from-liberator
  396  bzr merge ../moebius2-from-liberator
  397  bzr status
  398  bzr diff
  399  bzr ci -m merge
  400  bzr push
  401  bzr pull ../moebius2-from-liberator
  402  bzr merge ../moebius2-from-liberator
  403  bzr status
  404  bzr ci -m merge
  405  bzr status
  406  bzr pull ../moebius2-from-liberator
  407  cd things/moebius2
  408  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM 
  409  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM 
  410  ./interpolate-125 -aa best-64.CFM -ostart-125.cfm
  411  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  412  sync
  413  cd things/moebius2
  414  pwd
  415  bzr pull ../moebius2-from-liberator
  416  cat new-costs.history 
  417  cp start-64.cfm wip-64.cfm 
  418  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  419  cp wip-64.cfm best-64.CFM
  420  ./interpolate-125 -aa best-64.CFM -ostart-125.cfm
  421  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  422  cp start-125.cfm wip-125.cfm
  423  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  424  ./minimise-125 wip-125.cfm -iwip-125.cfm -obest-125.CFM
  425  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  426  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  427  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  428  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  429  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  430  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  431  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  432  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  433  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  434  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  435  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  436  ./interpolate-125 -aa best-64.CFM -ostart-125.cfm
  437  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  438  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  439  ./interpolate-125 -aa wip-64.cfm -ostart-125.cfm
  440  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  441  bzr status
  442  bzr diff
  443  bzr diff Makefile 
  444  bzr ci -m 'build more stuff' Makefile 
  445  bzr stauts
  446  bzr status
  447  bzr ci -m 'wip energy functions'
  448  bzr pull ../moebius2-from-liberator/
  449  bzr status
  450  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  451  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  452  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  453  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  454  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  455  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  456  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  457  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM
  458  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM 2>&1 |less
  459  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM 2>&1 |less
  460  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM 2>&1 |less
  461  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM 
  462  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM 
  463  bzr ci -m 'before abandon this version of rim twist which is nonsense'
  464  bzr ci -m 'before abandon this version of rim twist which is nonsense'
  465  bzr uncommit
  466  bzr status
  467  bzr log |less
  468  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM 
  469  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM 
  470  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM 
  471  ./interpolate-125 -aa best-64.CFM -ostart-125.cfm
  472  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  473  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  474  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  475  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  476  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  477  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  478  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  479  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  480  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  481  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  482  bzr status
  483  bzr ci -m 'wip before increase power of bendings'
  484  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  485  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  486  bzr status
  487  bzr diff
  488  bzr ci -m 'changed powers on vertex displacements  -- tweaked parameters for XBITS==5'
  489  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM 
  490  ./minimise-64 start-64.cfm -iwip-64.cfm -obest-64.CFM 
  491  bzr status
  492  history >nice-64.history 
  493  mv nice-64.history  nice-64-125.history 
  494  bzr add nice-64-125.history 
  495  bzr ci -m 'fixed XBITS==4'
  496  screen
  497  ./interpolate-125 -aa best-64.CFM -ostart-125.cfm
  498  cd things/moebius2
  499  ./minimise-125 start-125.cfm -iwip-125.cfm -obest-125.CFM
  500  bzr diff |less
  501  bzr ci -m 'scale 125 seems to work ish although could be more bowl-like'
  502  make -j4
  503  make -j4 minimise-246
  504  cat nice-64-125.history 
  505  history >>nice-64-125.history